Adversaries may delete files left behind by the actions of their intrusion activity. Malware, tools, or other non-native files dropped or created on a system by an adversary (ex: Ingress Tool Transfer) may leave traces to indicate to what was done within a network and how. Removal of these files can occur during an intrusion, or as part of a post-intrusion process to minimize the adversary's footprint.

There are tools available from the host operating system to perform cleanup, but adversaries may use other tools as well. Examples of built-in Command and Scripting Interpreter functions include del on Windows and rm or unlink on Linux and macOS.